Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4bQ9ES00 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Gm8493-201ENSMUST00000196881 489 ntBASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4bQ9ES00 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Gm27454-201ENSMUST00000185090 204 ntBASIC16.86■□□□□ 0.29
Ube4bQ9ES00 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4bQ9ES00 Tgds-204ENSMUST00000228543 1594 ntBASIC16.85■□□□□ 0.29
Ube4bQ9ES00 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Smad6-203ENSMUST00000179458 273 ntBASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4bQ9ES00 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Gm43173-201ENSMUST00000202246 593 ntBASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4bQ9ES00 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.84■□□□□ 0.29
Ube4bQ9ES00 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ube4bQ9ES00 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ube4bQ9ES00 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4bQ9ES00 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4bQ9ES00 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4bQ9ES00 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4bQ9ES00 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4bQ9ES00 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4bQ9ES00 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ube4bQ9ES00 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms