Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps35Q9EQH3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Vps35Q9EQH3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps35Q9EQH3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps35Q9EQH3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps35Q9EQH3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps35Q9EQH3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps35Q9EQH3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Gm10812-201ENSMUST00000099864 546 ntBASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps35Q9EQH3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps35Q9EQH3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps35Q9EQH3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps35Q9EQH3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vps35Q9EQH3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps35Q9EQH3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms