Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf6Q9DBU5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Gm37292-201ENSMUST00000192062 758 ntBASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf6Q9DBU5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf6Q9DBU5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf6Q9DBU5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.83■□□□□ 0.61
Rnf6Q9DBU5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf6Q9DBU5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Gm15378-201ENSMUST00000121894 207 ntBASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Gm12382-201ENSMUST00000122005 922 ntBASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf6Q9DBU5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf6Q9DBU5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf6Q9DBU5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf6Q9DBU5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Gm43183-201ENSMUST00000200632 547 ntBASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf6Q9DBU5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Gm10698-201ENSMUST00000182663 604 ntBASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf6Q9DBU5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms