Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chmp2aQ9DB34 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm12382-201ENSMUST00000122005 922 ntBASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chmp2aQ9DB34 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Chmp2aQ9DB34 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp2aQ9DB34 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp2aQ9DB34 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Chmp2aQ9DB34 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp2aQ9DB34 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chmp2aQ9DB34 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Gm37292-201ENSMUST00000192062 758 ntBASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Idnk-204ENSMUST00000226010 1898 ntBASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chmp2aQ9DB34 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chmp2aQ9DB34 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Gm29791-202ENSMUST00000207888 369 ntBASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Chmp2aQ9DB34 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms