Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssmem1Q9D9Y8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Gm10517-202ENSMUST00000192970 758 ntBASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssmem1Q9D9Y8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Gm4974-201ENSMUST00000209974 875 ntBASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Timm23-208ENSMUST00000226683 750 ntBASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Idnk-204ENSMUST00000226010 1898 ntBASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssmem1Q9D9Y8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Odf3b-204ENSMUST00000227834 930 ntBASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssmem1Q9D9Y8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Gm37055-201ENSMUST00000191866 133 ntBASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssmem1Q9D9Y8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Mir6982-201ENSMUST00000184354 68 ntBASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms