Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Gm10653-202ENSMUST00000139570 835 ntBASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf225Q9D7D1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Gm5643-201ENSMUST00000117081 966 ntBASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.4■□□□□ 0.54
Rnf225Q9D7D1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Rnf225Q9D7D1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf225Q9D7D1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf225Q9D7D1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Rnf225Q9D7D1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Gm42660-201ENSMUST00000197733 947 ntBASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf225Q9D7D1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf225Q9D7D1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Gm10698-201ENSMUST00000182663 604 ntBASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf225Q9D7D1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf225Q9D7D1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms