Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Idnk-204ENSMUST00000226010 1898 ntBASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Snx29Q9D3S3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx29Q9D3S3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx29Q9D3S3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.23■□□□□ 0.67
Snx29Q9D3S3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Actl10-202ENSMUST00000226583 1501 ntBASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.22■□□□□ 0.67
Snx29Q9D3S3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Gm10566-201ENSMUST00000086739 996 ntBASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx29Q9D3S3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx29Q9D3S3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Gm11950-201ENSMUST00000121615 838 ntBASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms