Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx47Q9CWX9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Gm13216-201ENSMUST00000117145 591 ntBASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx47Q9CWX9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx47Q9CWX9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx47Q9CWX9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx47Q9CWX9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms