Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.5■□□□□ 0.71
Ccdc43Q9CR29 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc43Q9CR29 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc43Q9CR29 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Flg-201ENSMUST00000050758 1488 ntBASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc43Q9CR29 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc43Q9CR29 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc43Q9CR29 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Gm4968-201ENSMUST00000071458 858 ntBASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc43Q9CR29 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Gm2559-201ENSMUST00000201323 363 ntBASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms