Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rer1Q9CQU3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Mir5133-201ENSMUST00000174955 77 ntBASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Gm27405-201ENSMUST00000184201 112 ntBASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rer1Q9CQU3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Gm13148-201ENSMUST00000118892 745 ntBASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rer1Q9CQU3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rer1Q9CQU3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rer1Q9CQU3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Zfp783-201ENSMUST00000095946 670 ntBASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rer1Q9CQU3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Flg-201ENSMUST00000050758 1488 ntBASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rer1Q9CQU3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms