Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh4Q99MT2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.06■□□□□ 0.32
Msh4Q99MT2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh4Q99MT2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh4Q99MT2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.04■□□□□ 0.32
Msh4Q99MT2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh4Q99MT2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Msh4Q99MT2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.03■□□□□ 0.32
Msh4Q99MT2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh4Q99MT2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.02■□□□□ 0.32
Msh4Q99MT2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.02■□□□□ 0.32
Msh4Q99MT2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.02■□□□□ 0.32
Msh4Q99MT2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms