Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Gm7889-201ENSMUST00000185591 958 ntBASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcc1Q99LI2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Clcc1Q99LI2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcc1Q99LI2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcc1Q99LI2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Fst-202ENSMUST00000223640 2612 ntBASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcc1Q99LI2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcc1Q99LI2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Clcc1Q99LI2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcc1Q99LI2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcc1Q99LI2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Clcc1Q99LI2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Clcc1Q99LI2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcc1Q99LI2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms