Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf34Q99KR6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf34Q99KR6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf34Q99KR6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf34Q99KR6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rnf34Q99KR6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf34Q99KR6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf34Q99KR6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf34Q99KR6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rnf34Q99KR6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf34Q99KR6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf34Q99KR6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf34Q99KR6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf34Q99KR6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf34Q99KR6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.78■□□□□ 0.6
Rnf34Q99KR6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.78■□□□□ 0.6
Rnf34Q99KR6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf34Q99KR6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf34Q99KR6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf34Q99KR6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms