Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smarcd2Q99JR8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarcd2Q99JR8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcd2Q99JR8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.71■□□□□ 0.42
Smarcd2Q99JR8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcd2Q99JR8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcd2Q99JR8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Gm26039-201ENSMUST00000158152 144 ntBASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smarcd2Q99JR8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Gm17971-201ENSMUST00000190239 806 ntBASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd2Q99JR8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Gm17807-201ENSMUST00000186869 298 ntBASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Smarcd2Q99JR8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms