Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.21■□□□□ 0.83
Rfc4Q99J62 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfc4Q99J62 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfc4Q99J62 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Gm29518-201ENSMUST00000190858 372 ntBASIC20.19■□□□□ 0.82
Rfc4Q99J62 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rfc4Q99J62 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfc4Q99J62 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.18■□□□□ 0.82
Rfc4Q99J62 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.18■□□□□ 0.82
Rfc4Q99J62 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfc4Q99J62 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rfc4Q99J62 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.17■□□□□ 0.82
Rfc4Q99J62 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.17■□□□□ 0.82
Rfc4Q99J62 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Gm7213-201ENSMUST00000215977 950 ntBASIC20.17■□□□□ 0.82
Rfc4Q99J62 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfc4Q99J62 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Gm17807-201ENSMUST00000186869 298 ntBASIC20.16■□□□□ 0.82
Rfc4Q99J62 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Rfc4Q99J62 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Gm29791-202ENSMUST00000207888 369 ntBASIC20.15■□□□□ 0.82
Rfc4Q99J62 Gm9731-201ENSMUST00000209480 747 ntBASIC20.15■□□□□ 0.82
Rfc4Q99J62 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfc4Q99J62 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Rfc4Q99J62 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Gm28033-201ENSMUST00000184224 96 ntBASIC20.14■□□□□ 0.81
Rfc4Q99J62 Gm37025-201ENSMUST00000195159 829 ntBASIC20.14■□□□□ 0.81
Rfc4Q99J62 Gm17808-201ENSMUST00000200859 894 ntBASIC20.14■□□□□ 0.81
Rfc4Q99J62 Il3ra-202ENSMUST00000223589 738 ntBASIC20.14■□□□□ 0.81
Rfc4Q99J62 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfc4Q99J62 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms