Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gm6139-201ENSMUST00000079261 882 ntBASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp1aQ921W0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp1aQ921W0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp1aQ921W0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Idnk-204ENSMUST00000226010 1898 ntBASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Gm43017-201ENSMUST00000198296 752 ntBASIC15.48■□□□□ 0.07
Chmp1aQ921W0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp1aQ921W0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Gm13146-201ENSMUST00000118508 780 ntBASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Gm27454-201ENSMUST00000185090 204 ntBASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Gm43060-201ENSMUST00000200621 289 ntBASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Gm9988-201ENSMUST00000069786 435 ntBASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp1aQ921W0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Gm22325-201ENSMUST00000158904 308 ntBASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp1aQ921W0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms