Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Actl10-202ENSMUST00000226583 1501 ntBASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sf3b3Q921M3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sf3b3Q921M3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sf3b3Q921M3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3b3Q921M3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3b3Q921M3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.14■□□□□ 0.98
Sf3b3Q921M3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3b3Q921M3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sf3b3Q921M3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3b3Q921M3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sf3b3Q921M3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Gm18958-201ENSMUST00000174258 762 ntBASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3b3Q921M3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.1■□□□□ 0.97
Sf3b3Q921M3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms