Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha11Q91Y19 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Gm12085-201ENSMUST00000119263 940 ntBASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Mir7071-201ENSMUST00000184847 69 ntBASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha11Q91Y19 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha11Q91Y19 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Gm3375-201ENSMUST00000203929 796 ntBASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Grk6-206ENSMUST00000224995 2971 ntBASIC18.42■□□□□ 0.54
Pcdha11Q91Y19 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Gm15565-201ENSMUST00000118890 427 ntBASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha11Q91Y19 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha11Q91Y19 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha11Q91Y19 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms