Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha2Q91Y17 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Gm5417-201ENSMUST00000079706 384 ntBASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha2Q91Y17 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha2Q91Y17 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha2Q91Y17 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha2Q91Y17 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha2Q91Y17 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha2Q91Y17 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms