Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb8Q91XZ2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb8Q91XZ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb8Q91XZ2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb8Q91XZ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Gm11249-201ENSMUST00000117071 859 ntBASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb8Q91XZ2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb8Q91XZ2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb8Q91XZ2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb8Q91XZ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb8Q91XZ2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb8Q91XZ2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb8Q91XZ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb8Q91XZ2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms