Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb1Q91XX8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Pcdhgb1Q91XX8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Gm13559-201ENSMUST00000120476 863 ntBASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb1Q91XX8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.19■□□□□ 0.5
Pcdhgb1Q91XX8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb1Q91XX8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Gm10231-201ENSMUST00000181584 441 ntBASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Gm10175-202ENSMUST00000208752 441 ntBASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb1Q91XX8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Gm7889-201ENSMUST00000185591 958 ntBASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhgb1Q91XX8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms