Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.44■□□□□ 0.54
Snx9Q91VH2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snx9Q91VH2 Idnk-204ENSMUST00000226010 1898 ntBASIC18.43■□□□□ 0.54
Snx9Q91VH2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snx9Q91VH2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Snx9Q91VH2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.42■□□□□ 0.54
Snx9Q91VH2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snx9Q91VH2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.41■□□□□ 0.54
Snx9Q91VH2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Gm21814-202ENSMUST00000203277 873 ntBASIC18.41■□□□□ 0.54
Snx9Q91VH2 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.41■□□□□ 0.54
Snx9Q91VH2 Odf3b-204ENSMUST00000227834 930 ntBASIC18.41■□□□□ 0.54
Snx9Q91VH2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snx9Q91VH2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.4■□□□□ 0.54
Snx9Q91VH2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx9Q91VH2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Snx9Q91VH2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Snx9Q91VH2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.39■□□□□ 0.53
Snx9Q91VH2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.39■□□□□ 0.53
Snx9Q91VH2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.39■□□□□ 0.53
Snx9Q91VH2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms