Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.04■□□□□ 0.96
StrcQ8VIM6 Gm37935-201ENSMUST00000192012 982 ntBASIC21.04■□□□□ 0.96
StrcQ8VIM6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.03■□□□□ 0.96
StrcQ8VIM6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
StrcQ8VIM6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
StrcQ8VIM6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
StrcQ8VIM6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.02■□□□□ 0.95
StrcQ8VIM6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.01■□□□□ 0.95
StrcQ8VIM6 Rps4l-201ENSMUST00000071745 943 ntBASIC21.01■□□□□ 0.95
StrcQ8VIM6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
StrcQ8VIM6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21■□□□□ 0.95
StrcQ8VIM6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
StrcQ8VIM6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Gm15372-201ENSMUST00000120729 834 ntBASIC21■□□□□ 0.95
StrcQ8VIM6 Vti1a-206ENSMUST00000225529 1244 ntBASIC21■□□□□ 0.95
StrcQ8VIM6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
StrcQ8VIM6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.99■□□□□ 0.95
StrcQ8VIM6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.99■□□□□ 0.95
StrcQ8VIM6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
StrcQ8VIM6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
StrcQ8VIM6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Gm12644-201ENSMUST00000119935 606 ntBASIC20.98■□□□□ 0.95
StrcQ8VIM6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.98■□□□□ 0.95
StrcQ8VIM6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.98■□□□□ 0.95
StrcQ8VIM6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
StrcQ8VIM6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms