Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps39Q8R5L3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps39Q8R5L3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.55■□□□□ 0.4
Vps39Q8R5L3 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps39Q8R5L3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps39Q8R5L3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps39Q8R5L3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms