Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pspc1Q8R326 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Gm6659-201ENSMUST00000174752 547 ntBASIC20.16■□□□□ 0.82
Pspc1Q8R326 Gm45058-201ENSMUST00000205810 766 ntBASIC20.16■□□□□ 0.82
Pspc1Q8R326 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pspc1Q8R326 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Gm2274-201ENSMUST00000184539 609 ntBASIC20.15■□□□□ 0.82
Pspc1Q8R326 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pspc1Q8R326 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pspc1Q8R326 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pspc1Q8R326 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pspc1Q8R326 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Pspc1Q8R326 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pspc1Q8R326 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.14■□□□□ 0.81
Pspc1Q8R326 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.14■□□□□ 0.81
Pspc1Q8R326 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pspc1Q8R326 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Gm24841-201ENSMUST00000158676 357 ntBASIC20.13■□□□□ 0.81
Pspc1Q8R326 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pspc1Q8R326 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pspc1Q8R326 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pspc1Q8R326 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pspc1Q8R326 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms