Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chmp7Q8R1T1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chmp7Q8R1T1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Gm7284-201ENSMUST00000131667 944 ntBASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Gm7213-201ENSMUST00000215977 950 ntBASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Chmp7Q8R1T1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Chmp7Q8R1T1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Chmp7Q8R1T1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chmp7Q8R1T1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
Chmp7Q8R1T1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chmp7Q8R1T1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chmp7Q8R1T1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chmp7Q8R1T1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Gm17661-201ENSMUST00000170317 270 ntBASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Ank2-226ENSMUST00000189368 339 ntBASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Fst-202ENSMUST00000223640 2612 ntBASIC22.44■■□□□ 1.18
Chmp7Q8R1T1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Gm5587-201ENSMUST00000206270 674 ntBASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Chmp7Q8R1T1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Gm9103-201ENSMUST00000119371 405 ntBASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chmp7Q8R1T1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Gm9013-201ENSMUST00000132939 882 ntBASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Gm27741-201ENSMUST00000185060 237 ntBASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Chmp7Q8R1T1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chmp7Q8R1T1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Chmp7Q8R1T1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Chmp7Q8R1T1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms