Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Gm22325-201ENSMUST00000158904 308 ntBASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.17■□□□□ 0.82
Pdlim2Q8R1G6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pdlim2Q8R1G6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Gm14117-201ENSMUST00000122417 843 ntBASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Gm38205-201ENSMUST00000192243 258 ntBASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim2Q8R1G6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pdlim2Q8R1G6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pdlim2Q8R1G6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim2Q8R1G6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.11■□□□□ 0.81
Pdlim2Q8R1G6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms