Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml1Q8K558 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml1Q8K558 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Treml1Q8K558 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Treml1Q8K558 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml1Q8K558 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.27■□□□□ 0.35
Treml1Q8K558 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml1Q8K558 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml1Q8K558 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Treml1Q8K558 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.26■□□□□ 0.35
Treml1Q8K558 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Treml1Q8K558 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.26■□□□□ 0.35
Treml1Q8K558 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.26■□□□□ 0.35
Treml1Q8K558 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.26■□□□□ 0.35
Treml1Q8K558 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Treml1Q8K558 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Treml1Q8K558 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Treml1Q8K558 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml1Q8K558 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.25■□□□□ 0.35
Treml1Q8K558 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.25■□□□□ 0.35
Treml1Q8K558 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.25■□□□□ 0.35
Treml1Q8K558 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Treml1Q8K558 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Treml1Q8K558 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Treml1Q8K558 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.24■□□□□ 0.35
Treml1Q8K558 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Treml1Q8K558 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Treml1Q8K558 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.23■□□□□ 0.35
Treml1Q8K558 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Treml1Q8K558 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
Treml1Q8K558 Gm10517-202ENSMUST00000192970 758 ntBASIC17.23■□□□□ 0.35
Treml1Q8K558 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Treml1Q8K558 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Treml1Q8K558 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Treml1Q8K558 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.22■□□□□ 0.35
Treml1Q8K558 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Treml1Q8K558 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.22■□□□□ 0.35
Treml1Q8K558 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.22■□□□□ 0.35
Treml1Q8K558 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Treml1Q8K558 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Treml1Q8K558 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Treml1Q8K558 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms