Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn1Q8K445 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.56■□□□□ 0.24
Clrn1Q8K445 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn1Q8K445 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.55■□□□□ 0.24
Clrn1Q8K445 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn1Q8K445 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn1Q8K445 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clrn1Q8K445 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn1Q8K445 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.54■□□□□ 0.24
Clrn1Q8K445 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.54■□□□□ 0.24
Clrn1Q8K445 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn1Q8K445 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clrn1Q8K445 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn1Q8K445 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn1Q8K445 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn1Q8K445 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn1Q8K445 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Gm5643-201ENSMUST00000117081 966 ntBASIC16.53■□□□□ 0.24
Clrn1Q8K445 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clrn1Q8K445 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Gm42545-201ENSMUST00000202755 922 ntBASIC16.52■□□□□ 0.24
Clrn1Q8K445 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Gm18025-201ENSMUST00000221733 862 ntBASIC16.52■□□□□ 0.24
Clrn1Q8K445 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.52■□□□□ 0.24
Clrn1Q8K445 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn1Q8K445 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn1Q8K445 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn1Q8K445 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.52■□□□□ 0.23
Clrn1Q8K445 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn1Q8K445 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn1Q8K445 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn1Q8K445 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.51■□□□□ 0.23
Clrn1Q8K445 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.51■□□□□ 0.23
Clrn1Q8K445 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn1Q8K445 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn1Q8K445 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms