Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shtn1Q8K2Q9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shtn1Q8K2Q9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Shtn1Q8K2Q9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.64■□□□□ 0.9
Shtn1Q8K2Q9 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shtn1Q8K2Q9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Mir3081-201ENSMUST00000175305 84 ntBASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Shtn1Q8K2Q9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Gm24589-201ENSMUST00000116692 94 ntBASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Gm11950-201ENSMUST00000121615 838 ntBASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shtn1Q8K2Q9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Gm11355-201ENSMUST00000121120 306 ntBASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shtn1Q8K2Q9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shtn1Q8K2Q9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shtn1Q8K2Q9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Shtn1Q8K2Q9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Shtn1Q8K2Q9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shtn1Q8K2Q9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.57■□□□□ 0.88
Shtn1Q8K2Q9 Gm18958-201ENSMUST00000174258 762 ntBASIC20.57■□□□□ 0.88
Shtn1Q8K2Q9 Gm18115-201ENSMUST00000221209 621 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms