Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clip4Q8CI96 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clip4Q8CI96 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.64■□□□□ 0.41
Clip4Q8CI96 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.64■□□□□ 0.41
Clip4Q8CI96 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.63■□□□□ 0.41
Clip4Q8CI96 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clip4Q8CI96 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Gm11249-201ENSMUST00000117071 859 ntBASIC17.62■□□□□ 0.41
Clip4Q8CI96 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Flg-201ENSMUST00000050758 1488 ntBASIC17.62■□□□□ 0.41
Clip4Q8CI96 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clip4Q8CI96 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.61■□□□□ 0.41
Clip4Q8CI96 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clip4Q8CI96 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Clip4Q8CI96 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.61■□□□□ 0.41
Clip4Q8CI96 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.61■□□□□ 0.41
Clip4Q8CI96 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.61■□□□□ 0.41
Clip4Q8CI96 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clip4Q8CI96 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.6■□□□□ 0.41
Clip4Q8CI96 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clip4Q8CI96 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms