Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbm28Q8CGC6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbm28Q8CGC6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rbm28Q8CGC6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbm28Q8CGC6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rbm28Q8CGC6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Gm10517-202ENSMUST00000192970 758 ntBASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rbm28Q8CGC6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Gm7889-201ENSMUST00000185591 958 ntBASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbm28Q8CGC6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms