Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Gm10175-202ENSMUST00000208752 441 ntBASIC21.64■■□□□ 1.05
Smc4Q8CG47 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Idnk-204ENSMUST00000226010 1898 ntBASIC21.64■■□□□ 1.05
Smc4Q8CG47 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.63■■□□□ 1.05
Smc4Q8CG47 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.63■■□□□ 1.05
Smc4Q8CG47 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smc4Q8CG47 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smc4Q8CG47 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smc4Q8CG47 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Gm2274-201ENSMUST00000184539 609 ntBASIC21.6■■□□□ 1.05
Smc4Q8CG47 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smc4Q8CG47 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc4Q8CG47 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc4Q8CG47 Gm7638-201ENSMUST00000121348 967 ntBASIC21.59■■□□□ 1.05
Smc4Q8CG47 Gm37025-201ENSMUST00000195159 829 ntBASIC21.59■■□□□ 1.05
Smc4Q8CG47 Gm18959-201ENSMUST00000208954 655 ntBASIC21.59■■□□□ 1.05
Smc4Q8CG47 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smc4Q8CG47 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.59■■□□□ 1.05
Smc4Q8CG47 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Smc4Q8CG47 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smc4Q8CG47 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Smc4Q8CG47 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc4Q8CG47 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smc4Q8CG47 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms