Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.72■■□□□ 1.07
Smc5Q8CG46 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc5Q8CG46 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Mtag2-201ENSMUST00000058665 714 ntBASIC21.7■■□□□ 1.06
Smc5Q8CG46 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc5Q8CG46 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.69■■□□□ 1.06
Smc5Q8CG46 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc5Q8CG46 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.68■■□□□ 1.06
Smc5Q8CG46 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc5Q8CG46 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.67■■□□□ 1.06
Smc5Q8CG46 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.67■■□□□ 1.06
Smc5Q8CG46 Rab3c-203ENSMUST00000224180 967 ntBASIC21.67■■□□□ 1.06
Smc5Q8CG46 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc5Q8CG46 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Gm13216-201ENSMUST00000117145 591 ntBASIC21.66■■□□□ 1.06
Smc5Q8CG46 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Gm18284-201ENSMUST00000172604 624 ntBASIC21.66■■□□□ 1.06
Smc5Q8CG46 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc5Q8CG46 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC21.65■■□□□ 1.06
Smc5Q8CG46 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms