Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Gm10252-201ENSMUST00000209541 832 ntBASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vcpip1Q8CDG3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.83■□□□□ 0.61
Vcpip1Q8CDG3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Vcpip1Q8CDG3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Flg-201ENSMUST00000050758 1488 ntBASIC18.83■□□□□ 0.6
Vcpip1Q8CDG3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcpip1Q8CDG3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcpip1Q8CDG3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.8■□□□□ 0.6
Vcpip1Q8CDG3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms