Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Gm13836-201ENSMUST00000121159 501 ntBASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf31Q8CCF0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Gm6433-201ENSMUST00000118634 875 ntBASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf31Q8CCF0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf31Q8CCF0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf31Q8CCF0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Prpf31Q8CCF0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Prpf31Q8CCF0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf31Q8CCF0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Grk6-206ENSMUST00000224995 2971 ntBASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms