Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alx1Q8C8B0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.5■□□□□ 0.87
Alx1Q8C8B0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.5■□□□□ 0.87
Alx1Q8C8B0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.49■□□□□ 0.87
Alx1Q8C8B0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Gm15565-201ENSMUST00000118890 427 ntBASIC20.48■□□□□ 0.87
Alx1Q8C8B0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Gm17661-201ENSMUST00000170317 270 ntBASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Gm30025-201ENSMUST00000218555 728 ntBASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx1Q8C8B0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx1Q8C8B0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx1Q8C8B0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alx1Q8C8B0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Gm11539-201ENSMUST00000119837 557 ntBASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Gm13436-201ENSMUST00000120418 567 ntBASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Gm13559-201ENSMUST00000120476 863 ntBASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms