Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp43Q8BUM9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Usp43Q8BUM9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp43Q8BUM9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp43Q8BUM9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp43Q8BUM9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp43Q8BUM9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp43Q8BUM9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp43Q8BUM9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp43Q8BUM9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp43Q8BUM9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms