Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smg1Q8BKX6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smg1Q8BKX6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.86□□□□□ -0.03
Smg1Q8BKX6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Gm7638-201ENSMUST00000121348 967 ntBASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Rps4l-201ENSMUST00000071745 943 ntBASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smg1Q8BKX6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Gm45328-201ENSMUST00000210942 917 ntBASIC14.84□□□□□ -0.03
Smg1Q8BKX6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Smg1Q8BKX6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smg1Q8BKX6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smg1Q8BKX6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smg1Q8BKX6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smg1Q8BKX6 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Gm10418-201ENSMUST00000100943 576 ntBASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Gm6736-201ENSMUST00000166583 948 ntBASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smg1Q8BKX6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Gm23935-201ENSMUST00000102303 57 ntBASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Gm24270-201ENSMUST00000102326 57 ntBASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Gm24245-201ENSMUST00000157318 57 ntBASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smg1Q8BKX6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms