Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp2bQ8BJF9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp2bQ8BJF9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp2bQ8BJF9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp2bQ8BJF9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Chmp2bQ8BJF9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp2bQ8BJF9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.91■□□□□ 0.46
Chmp2bQ8BJF9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.9■□□□□ 0.46
Chmp2bQ8BJF9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp2bQ8BJF9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp2bQ8BJF9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms