Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clrn3Q8BHH8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Gm10418-201ENSMUST00000100943 576 ntBASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clrn3Q8BHH8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Gm10138-203ENSMUST00000206952 366 ntBASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Clrn3Q8BHH8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Mir6349-201ENSMUST00000184059 97 ntBASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn3Q8BHH8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Gm13158-201ENSMUST00000122007 736 ntBASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Gm29257-201ENSMUST00000186115 639 ntBASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clrn3Q8BHH8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms