Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1l4Q8BGJ9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1l4Q8BGJ9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
U2af1l4Q8BGJ9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1l4Q8BGJ9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.64■□□□□ 0.9
U2af1l4Q8BGJ9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.64■□□□□ 0.9
U2af1l4Q8BGJ9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Gm11927-201ENSMUST00000118472 759 ntBASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
U2af1l4Q8BGJ9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1l4Q8BGJ9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Gm21814-202ENSMUST00000203277 873 ntBASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1l4Q8BGJ9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1l4Q8BGJ9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Mtag2-201ENSMUST00000058665 714 ntBASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1l4Q8BGJ9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
U2af1l4Q8BGJ9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms