Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim65Q8BFW4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim65Q8BFW4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim65Q8BFW4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim65Q8BFW4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim65Q8BFW4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Mir8112-201ENSMUST00000184382 131 ntBASIC18.8■□□□□ 0.6
Trim65Q8BFW4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.8■□□□□ 0.6
Trim65Q8BFW4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim65Q8BFW4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.79■□□□□ 0.6
Trim65Q8BFW4 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.79■□□□□ 0.6
Trim65Q8BFW4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim65Q8BFW4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Gm6576-201ENSMUST00000169678 883 ntBASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.78■□□□□ 0.6
Trim65Q8BFW4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim65Q8BFW4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim65Q8BFW4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Gm20760-201ENSMUST00000179197 648 ntBASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim65Q8BFW4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms