Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.27■□□□□ 0.36
Ubp1Q811S7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubp1Q811S7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubp1Q811S7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubp1Q811S7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubp1Q811S7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubp1Q811S7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.26■□□□□ 0.35
Ubp1Q811S7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ubp1Q811S7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ubp1Q811S7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.25■□□□□ 0.35
Ubp1Q811S7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ubp1Q811S7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.24■□□□□ 0.35
Ubp1Q811S7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.24■□□□□ 0.35
Ubp1Q811S7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.24■□□□□ 0.35
Ubp1Q811S7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ubp1Q811S7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Gm13401-201ENSMUST00000117074 291 ntBASIC17.23■□□□□ 0.35
Ubp1Q811S7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.23■□□□□ 0.35
Ubp1Q811S7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.23■□□□□ 0.35
Ubp1Q811S7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.23■□□□□ 0.35
Ubp1Q811S7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubp1Q811S7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.22■□□□□ 0.35
Ubp1Q811S7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubp1Q811S7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms