Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tspan18Q80WR1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tspan18Q80WR1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tspan18Q80WR1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Tspan18Q80WR1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.63■□□□□ 0.57
Tspan18Q80WR1 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tspan18Q80WR1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Gm10231-201ENSMUST00000181584 441 ntBASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Gm45058-201ENSMUST00000205810 766 ntBASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Gm10175-202ENSMUST00000208752 441 ntBASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan18Q80WR1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.61■□□□□ 0.57
Tspan18Q80WR1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Gm13474-201ENSMUST00000122466 815 ntBASIC18.6■□□□□ 0.57
Tspan18Q80WR1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Gm18959-201ENSMUST00000208954 655 ntBASIC18.6■□□□□ 0.57
Tspan18Q80WR1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tspan18Q80WR1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tspan18Q80WR1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.59■□□□□ 0.57
Tspan18Q80WR1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms