Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Gm18959-201ENSMUST00000208954 655 ntBASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubfd1Q78JW9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Gm7638-201ENSMUST00000121348 967 ntBASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ubfd1Q78JW9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubfd1Q78JW9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.05■□□□□ 0.32
Ubfd1Q78JW9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Gm45058-201ENSMUST00000205810 766 ntBASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubfd1Q78JW9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubfd1Q78JW9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms