Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ddx55Q6ZPL9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx55Q6ZPL9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Gm45328-201ENSMUST00000210942 917 ntBASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx55Q6ZPL9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx55Q6ZPL9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Olfr129-201ENSMUST00000122318 993 ntBASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Gm34391-201ENSMUST00000203706 907 ntBASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx55Q6ZPL9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx55Q6ZPL9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.94■□□□□ 0.78
Ddx55Q6ZPL9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx55Q6ZPL9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms