Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc88cQ6VGS5 Gm6659-201ENSMUST00000174752 547 ntBASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc88cQ6VGS5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Gm27463-201ENSMUST00000183569 57 ntBASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Gm18032-201ENSMUST00000222541 538 ntBASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc88cQ6VGS5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Rarb-207ENSMUST00000225921 2756 ntBASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc88cQ6VGS5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc88cQ6VGS5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Gm9731-201ENSMUST00000209480 747 ntBASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc88cQ6VGS5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Gm24841-201ENSMUST00000158676 357 ntBASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc88cQ6VGS5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Gm7977-201ENSMUST00000193787 748 ntBASIC19.41■□□□□ 0.7
Ccdc88cQ6VGS5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms