Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Gm12085-201ENSMUST00000119263 940 ntBASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Gm18959-201ENSMUST00000208954 655 ntBASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.04■□□□□ 0.96
Npc1l1Q6T3U4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Gm27463-201ENSMUST00000183569 57 ntBASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1l1Q6T3U4 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npc1l1Q6T3U4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.02■□□□□ 0.95
Npc1l1Q6T3U4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.02■□□□□ 0.95
Npc1l1Q6T3U4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Npc1l1Q6T3U4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Npc1l1Q6T3U4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1l1Q6T3U4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1l1Q6T3U4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1l1Q6T3U4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1l1Q6T3U4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1l1Q6T3U4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Npc1l1Q6T3U4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Gm23634-201ENSMUST00000175071 91 ntBASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Gm8969-201ENSMUST00000199694 526 ntBASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1l1Q6T3U4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Npc1l1Q6T3U4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms