Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn10aQ6QIY3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Gm6443-201ENSMUST00000203599 874 ntBASIC19.92■□□□□ 0.78
Scn10aQ6QIY3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gm12895-201ENSMUST00000122214 226 ntBASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn10aQ6QIY3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Gm43347-201ENSMUST00000200226 580 ntBASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Scn10aQ6QIY3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn10aQ6QIY3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Scn10aQ6QIY3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn10aQ6QIY3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Gm5864-201ENSMUST00000202263 970 ntBASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn10aQ6QIY3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn10aQ6QIY3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Gm27000-201ENSMUST00000182943 842 ntBASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn10aQ6QIY3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms